Content-type: text/html Man page of X-GEN

X-GEN

Section: X-GEN Commands (1)
Updated: April 2005
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NAME

X-GEN - pickuref  

SYNOPSIS

pickuref [-bei] [-s<val>]  

DESCRIPTION

"pickuref" goes through the current integrated-reflections (UREFLS) file and prints to XLOG all reflections that are identical or symmetry-related to those called out in the REFLIST. If a flag is set, a 15x15x7 dump of the raw data around the relevant reflection's centroid is also output. This raw-data dump will be dark-current- or background-subtracted if the user requests it.  

OPTIONS

-b
This toggles subtraction of the data in the background image before printing 15x15x7 dumps of the raw data around the reflections specified in the REFLIST. This is only meaningful if "-i" is specified.
-i
This toggles printing of a 15x15x7 dump of the raw data around the reflections specified in the REFLIST.
-e
This toggles whether the transformed-coordinate (alpha,beta,gamma) intensity and sigma or the conventional (X,Y,omega) intensity and sigma are printed. This is only meaningful if "-i" is specified.
-s<val>
This specifies the fraction of the dark current image that
will be subtracted from any image while dumping. Thus if this value is taken as 1., we will dump 15x15x7 boxes from (data frames - 1.0 dark-current image). Default value: 1.

Input Structure:

The REFLIST file consists of a series of lines containing the (h,k,l) values of the reflections for which the UREFLS results are to be output. Each line contains one (h,k,l) ordered triple in a free-form ASCII format.
 

REPORTING BUGS

Report bugs to Andy Howard at howard@iit.edu or 312-567-5881.  

COPYRIGHT

Copyright © 2002, Illinois Institute of Technology. See the file 'LICENSE' for information on usage and redistribution of this file, and for a DISCLAIMER OF ALL WARRANTIES


 

Index

NAME
SYNOPSIS
DESCRIPTION
OPTIONS
REPORTING BUGS
COPYRIGHT

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Time: 02:08:09 GMT, October 03, 2005